Semiquantum molecular dynamics simulation of liquid water by time-dependent Hartree approach.
نویسندگان
چکیده
Semiquantum liquid water molecular dynamics simulation was developed using the time-dependent Hartree approach. The classical intra- and intermolecular potential functions of water were extended to describe the wave packet (WP) hydrogen atoms. The equations of motion with an extended phase space including auxiliary coordinates and momenta representing the hydrogen WP widths were derived and solved. The molecular dynamics simulation of semiquantum water demonstrated that the semiquantum hydrogen atoms make the liquid water less structured and the hydrogen bonds weakened. The poor structurization in liquid water was inferred from the increased mobility of a water molecule and the redshift of OH stretching frequency. The zero-point energy introduced by the semiquantum hydrogens enhances the anharmonic potential effects and contributes to the redshifted OH stretching vibration. We found a significant peak around 4400 cm(-1) in the absorption spectrum resulting from the energy exchange between the WP width dynamics and the coupling of the OH stretching mode and the rotational motion of each water. We proposed that a liquid free energy landscape is smoothed due to semiquantum hydrogen atoms, and influences the liquid structure and dynamics.
منابع مشابه
Quantum effects of hydrogen nuclei on a structure and a dynamical rearrangement of hydrogen-bond networks
To understand anomalous energetics and dynamics in water, nuclear quantum effects such as zero-point energy and delocalization of wave packets(WPs) representing water hydrogen atoms should be essential. However, since quantum calculations of many-body dynamics are highly complicated in general, none has yet directly viewed the quantum WP dynamics of hydrogen atoms in liquid water. Our semiquant...
متن کاملMolecular Interaction of Benzalkonium Ibuprofenate and its Discrete Ingredients with Human Serum Albumin
Studying the interaction of pharmaceutical ionic liquids with human serum albumin (HSA) can help investigating whether or not ionic liquid formation can enhance pharmacological profile of the discrete ingredients. In this respect, in the present work, the interactions of Benzalkonium Ibuprofenate, as a well-known active pharmaceutical ionic liquid, Benzalkonium Chloride, and also Sodium Ibuprof...
متن کاملInvestigation of isomorph-invariance in liquid methane by molecular dynamics simulation
In this paper, isomorph invariance of liquid methane is investigated by means of constant-NVT molecular dynamics simulations. According to the data extracted from simulations, equilibrium fluctuations show strong correlation between potential energy U and virial W. We also generated isomorph state points and investigated invariance of certain thermodynamic, structural, and dynamical properties....
متن کاملInvestigation of Monte Carlo, Molecular Dynamic and Langevin dynamic simulation methods for Albumin- Methanol system and Albumin-Water system
Serum Albumin is the most aboundant protein in blood plasma. Its two major roles aremaintaining osmotic pressure and depositing and transporting compounds. In this paper,Albumin-methanol solution simulation is carried out by three techniques including MonteCarlo (MC), Molecular Dynamic (MD) and Langevin Dynamic (LD) simulations. Byinvestigating energy changes by time and temperature (between 27...
متن کاملMolecular Dynamics Simulation of Water Transportation through Aquaporin-4 in Rat Brain Cells
This paper investigates the mechanism of water transportation through aquaporin-4(AQP4) of ratbrain cells by means of molecular dynamics simulation with CHARMM software. The AQP4 wasembedded into a bilayer made of Dimystroilphosphatylcholine (DMPC). The results illustrate thatwater molecules move through AQP4's channel with change of orientation of oxygen of eachwater molecule.
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- The Journal of chemical physics
دوره 131 6 شماره
صفحات -
تاریخ انتشار 2009